Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015795503.1_cds_XP_016444420.1_3861
CDS Infomation

[gene=LOC107769694] [db_xref=GeneID:107769694] [protein=scarecrow-like protein 15] [protein_id=XP_016444420.1] [location=47798..49426] [gbkey=CDS]
Sequence

ATGAAAGTGCCCTTTTCCTCTAATGACAACGTGAGTTCAAAACCATTGATTAACAATAAC
AACAACAACCTCCGGAACGCTACTTTTCCGGCCGCCGCCAACGGCCCTAATTTGTGCTAC
GAACCCAAATCAGTCCTCGAACTCCGCCGCAGTCCCAGCCCTATCGTTGAGAAGCAGGTG
ATAACAAATCCTGATTTCTCCGCCCTTTGCGGCGGCGACGATCCTCTCCAGCTAGGTGAT
CATGTTCTGAGCAACTTCGAAGATTGGGATTCTTTGATGAGAGAACTTGGCTTGCAAGAC
GATTCTGCTTCACTCTCAAAATCTAACCACCCTCAACTCAGCCTTACACAAAGCGAGTCG
CTGACTCAGTTCCATAACCTCTCTGAATTCTCAGCTGACTCGACTCAGTTCCCTACCTCT
GATTTTTCTTTCTCTGAGAATTTCCCTCAGCAATTTCAATCAGTGAATCAGGGAAATTAC
ATTAACGCCCTTGATCTCTCCGGTGATATCCACCAGAATAATTGGAACGTAGGATTTGAT
TACGTGGATGAGCTCATTCGTTTCGCTGAGTGCTTCGAAACCAACGCGTTCCAGCTCGCA
CATGTGATACTGGCACGGCTCAATCAACGGCTCAGATCCGCCGCCGGAAAACCTCTCCAA
CGTGCTGCCTTTTACTTCAAGGAAGCACTCCAAGCCCAACTCGCTGGGTCAACTCGGCAG
ACTCGCCCTGCCAGCTCATCCGACGTGATTCAGACCATCAAATCCTACAAAATTTTCTCA
AACATATCTCCAATCCCTATGTTCTCCAGCTTTACGGCGAATCAAGCCGTGCTTGAGGCA
GTCGACGGCTCGATGCTAGTCCACGTCATCGACTTCGACATCGGACTCGGAGGCCACTGG
GCTTCCTTCATGAAAGAGTTAGCCGATAAAGCCGAGTGTCGTAAAGCCAACGCGCCGGTT
CTTCGAATTACGGCTCTAGTTCCTGAAGAGTACGCTGTGGAATCGAGGTTAATCAGAGAA
AATTTAACACAATTTGCTCGTGAACTCAATATCGGTTTCGAAATAGATTTTGTGCTAATT
CGAACTTTCGAGTTGTTATCCTTCAAAGCAATAAAGTTCATGGACGGAGAGAAGACAGCG
GTGCTTTTATCCCCCGCTATCTTCCGACGGATCGGGTCAGGGTTTGTTAACAACCTCCGT
CGTATTTCCCCTAACATGGTGGTACACGTGGACAGCGAAGGGCTGATGGGTTACGGAACA
GCGTCGTTTCGTCAGACAGTGATTGATGGGCTGGAATTTTACTCTACGTTGCTGGAATCA
CTAGAAGCAGCAAATATCGGTGGCGGAAATTGTGGGGATTGGATGAGGAAAATTGAAAAT
TTCGTGCTGTTCCCGAAGATAGTGGAGATGGTGGCGGCAGTAGGGCGGCGAGGAGGTGGT
TCGTGGAAGGATGCGATGGTGGCTGCCGGATTCCGGCCGGTGGGATTAAGCCAGTTTGCA
GATTTTCAAGCAGATTGTTTGTTAGGGAGGGTACAGGTTAGGGGATTCCACGTGGCAAAG
AGACAAGCGGAGATGTTGCTGTGCTGGCATGATAGGGCCCTAGTAGCCACGTCAGCTTGG
AGGTGTTAA

Peptide Sequence

PEP ID

XP_016444420.1
PEP Infomation

PREDICTED: scarecrow-like protein 15 [Nicotiana tabacum]
Sequence

MKVPFSSNDNVSSKPLINNNNNNLRNATFPAAANGPNLCYEPKSVLELRRSPSPIVEKQV
ITNPDFSALCGGDDPLQLGDHVLSNFEDWDSLMRELGLQDDSASLSKSNHPQLSLTQSES
LTQFHNLSEFSADSTQFPTSDFSFSENFPQQFQSVNQGNYINALDLSGDIHQNNWNVGFD
YVDELIRFAECFETNAFQLAHVILARLNQRLRSAAGKPLQRAAFYFKEALQAQLAGSTRQ
TRPASSSDVIQTIKSYKIFSNISPIPMFSSFTANQAVLEAVDGSMLVHVIDFDIGLGGHW
ASFMKELADKAECRKANAPVLRITALVPEEYAVESRLIRENLTQFARELNIGFEIDFVLI
RTFELLSFKAIKFMDGEKTAVLLSPAIFRRIGSGFVNNLRRISPNMVVHVDSEGLMGYGT
ASFRQTVIDGLEFYSTLLESLEAANIGGGNCGDWMRKIENFVLFPKIVEMVAAVGRRGGG
SWKDAMVAAGFRPVGLSQFADFQADCLLGRVQVRGFHVAKRQAEMLLCWHDRALVATSAW
RC

Transcript Sequence

Gene sequence data has not been registered.